CDS
| Accession Number | TCMCG006C35757 |
| gbkey | CDS |
| Protein Id | XP_013749984.1 |
| Location | join(20418751..20418849,20419030..20419327,20419399..20419606,20419688..20420015,20420215..20420331,20420413..20420541,20420611..20420805,20420893..20421087,20421194..20421331,20421429..20421551,20421628..20421881,20421982..20422085,20422310..20422404,20422496..20422720,20423059..20423238,20423310..20423382,20423492..20423559,20423699..20423844,20423937..20424045,20424120..20424266,20424338..20424385,20424460..20424588,20424704..20424946,20425023..20425154,20425240..20425325,20425421..20425526,20425782..20425877,20425974..20426126,20426312..20426494,20426570..20426799,20426896..20426989,20427076..20427204,20427290..20427334,20427508..20427702,20427963..20428089,20428174..20428274,20428552..20428689,20428766..20428849,20429219..20429365,20429452..20429583,20429684..20429731,20429823..20429969,20430046..20430107,20430239..20430392,20430473..20430664,20430744..20430848,20430933..20431067,20431148..20431606) |
| Gene | LOC106452420 |
| GeneID | 106452420 |
| Organism | Brassica napus |
Protein
| Length | 2376aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA293435 |
| db_source | XM_013894530.2 |
| Definition | CCR4-NOT transcription complex subunit 1 isoform X1 [Brassica napus] |
EGGNOG-MAPPER Annotation
| COG_category | K |
| Description | Domain of unknown function (DUF3819) |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko03019 [VIEW IN KEGG] |
| KEGG_ko |
ko:K12604
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway |
ko03018
[VIEW IN KEGG] map03018 [VIEW IN KEGG] |
| GOs | - |
Sequence
| CDS: ATGTCGATGACTCCGTCCAAGGTCGCCGGCCATACCCGGTTCTTACTCGAGCACTTTAATGATTCCGATGTCGACTCAATCGCCCAAGAGATCTGTCAGTTGGTTGATTATGGTGTTGAGGCAAGCATCCCAGTGCTCAAGACGTGCGTAGATTGCTTCACCGTCCGGAGAAGCCACCCTAATACGCTGCAGCTTGAGAAGCTGTTAGCCTTGGTCTTCAAACGTGTCCTCAAATTGTCTAATCTCGGAACCCTGCTTTCTCACGCACTCCAAGATGCTGACGTCACTCCAGAATTCGTTCATGATTTGGCAACTGCATTGGGCTTTTCAGTCTCTGATAAGATTACCTTTGCTCTGGCCCTGGTCGATTTTGAAACTTCTCATGCTAAGACTAGTGGACGAAACTTATTATTGGCGGAGATTGAGCAACTCTGTGCTAACAATGGCCAGATTGAGTCAACTGAGCAAATTCAGAACGTTGTTTTGTTTCTCCAGACATCCGAAGACCTCTCCGGGCATTTGGAGTCCTTCCTACAGCTTCTGTCTTCCTCTCAACCTAGAGATGACTTGTCTTTTGCACTTACGCCTCTCCTTTCTCAACACAGGAGCATTGATTCTGCTGAGAACGACTATGATGCTATCCTCACTGAAATCGATAAGGAAATTGCTGTTGGAGATCTCATTGGAGAATTAGGCTGTGGTTTCACTGCTGATGCCCAACAATGCAAACAGCTCTTGTCTAGTTTCGCACCCCTAAGAGAGGCTACTATCTCAAGAATTCTTGGTCATGTGGCTCGTACCTCTGCTGATCTTGAAGATAATCACACCACCTTTTCAACATTCAGTCTGGCCGTTGGTTGCTGCATTCCAACTGATCTGCCCACGCCAACGTCGTGGAATGTTGATATCTTGATTGAAACAATCAAGCAGCTTCAGGCTCCTGGCACAAGCTGGAGGAAAGTAATCGAGAATCTCGACCATAGTGGATTTGACATCGCTAATATGGAGTCTTTCTCGTTTTTCATGCGACTATATAAAACTGCTTGCAAGGACCCATTTCCTCTTGATGCTGTATGTGCTTCTGTCTGGAACAATATGGAAGGTCAATTATCCTTTCTTAAGCATGCAATAGCAGCTCCACCAGAAGTATTTACCTTTACGCATTCTCCAAGGAAGCTGGCATATATTGATAATATCATGCACAGCCATGATCAACAATTAGGAGTTTCCAATCAAGCATGGCTCTCTCTTGATCTCTTAGATGTACTCTGCCAACTGGCCGAGAGAGGTCATACTGTTTTAGTTAGTTCGATGCTCCAGTATCCACTCACACATTGTCCTAAAACATTGCTTCTTGGAATGACTCACGTCAAAACCGCCTATAATCTCATCCAGCGAGAGGTGGTATCTGCTATTCTTCCAGTGCTAATAACGAATTCCCAGGATAGTGGTTTCATTCTCAAGCTCTGGCATCAGAATGCTGAGCTCGTTCTGTGGGGGATTTTAAATGCCCAAAATCTTAAATCAGACGGCATACTCAGAATAATTGAAATCTTCCATGAGCTTAAGATTTTCTCTGTTGTTTTAGAATCAGTTCCAGTCTCATTCAGCATCAGATTGGCAGTCCTTGCCTCACTGAGAGGCTTTTTGGACATTGAGAACTGGTTGCCAAACTGTCTGTATGTGTATAAGGACCTCTTTGCTGAGGAGTGTCTCAAATTTGTCAAGTATGTGCATTTTAGCGAATCAGAGGATTTTACTTCCAAGCATTTTCATCCTTCGGATCCTTTATCAGATCTTCATTTGGATGCAACGACTTTGCTTTTGAAAGTTTTGAAAGCTCATGATAATGTGATTACTTCATCTCAACTAGTCGAAGAGATGGAAAAGGTCAATTCAGCAATCTTGGATTGTAATTCGAAACTGCAGAATGGGGAGGCTAAAGATTCCTCAGTTCCCAGTCCATACGGAGAAGATGTTGAGGAGGAAGCCAACGCTTATTTCCATCAAATGTTTTCCGGTCAGTTGAGTGTTGATGCAATGGTTCAAATGCTATCTCGATACAAGGAGTCTTTGGTTCAAAGGGAAAAATCAATTTTTGAATGCATGATTGCTAATCTGTTCGAGGAGTATCGTTTTTTCCCCAAGTATCCCGAGAGGCAGTTGAAAATAGCTTCCGTCCTCTTTGGTTCTGTTATTAAGCACCAGCTTGTTAGTTCCATCACACTGGGGATGGCACTGCGTCTAGTCTTGGATTCTTTGCGTAAGCCTGCAGATTCTAAAATGTTTCTGTTTGGAAGCAAAGCCCTGGAACAGTTCGTGAATCGTCTTGTTGAATTGCCTCAGTACTGCAACCATATTTTGCAAATATCTCATCTGCGTAGTACTCATCCCGAGTTAGTCGCTGTTATTGAACAAGCACTTTCAAGGATATCATCTGGTAATTTGGAATCAGATGCTTCGTTTTCGCACCCTGGTCCTTCACAGTCTCTCCCTGGAAATGGCGAGTTTAGTGTTTCTGGAATTGGCCAGTCTCCACTCCAACTTCCTTCTCCTGTACAGCCTCAACAGAAAAATGAAGTGCATATTGATGACCGCAGCAAAGTGCCAAGTGTGCCATCTATCGAAACAAAGCCACTTCTGCCCTCGTCATCTAGCAGTTCTGCTGATGTTTCTGTCATTCCTAAGAATCCTGGCATTTCGACTTCTTCATTGACCTCAGCTGGTTTTGTTCGTCCAGCTCGTGGAGCCACATCAACGAGGTTTGGCTCTGCTTTGAACATAGAAACCCTGGTTGCAGCAGCAGAGAGAAGGGAAAACGCAATAGAGGCTCCACCTTCAGATGTCCAGGACAAAATATCTTTCATAATCAATAATATCTCTATAGCTAACATTGAATCTAAAGGGAAAGAGTTCGCTGAGATTTTATCTCAACAATACTATCCTTGGTTCGCACAGTATATGGTTATGAAAAGAGCGAGCATCGAGCCCAATTTTCACGATTTGTACTTGAAGTTCTTGGACAAAGTTGATTCCAAGCTGTTGTTTAAGGAGATACTCCAAAATACATACGAAAATTGCAAGGTTCTGTTGGGTTCAGAGCTCATAAAGTCAAGTTCTGAAGAGCGATCTCTGCTTAAAAATTTAGGCAGCTGGCTTGGAAAGTTAACGATTGGAAGGAATTATGTTTTAAGGGCGCGAGAAATTGATCCAAAATCCTTGATTGTGGAGGCGTATGAAAAAGGGTTGATGATAGCAGTCATTCCATTCACTTCGAAGGTTCTGGAGCCATGCCAAAACAGTATTGCGTATCAGCCTCCCAATCCTTGGACAATGGCTATACTCGGGTTGCTTGCTGAGATTTATTCGATGCCAAACCTAAAAATGAATCTGAAGTTTGACATAGAGGTTCTATTCAAGAACCTTGGTGTTGATTTGAAAGAAGTAGCGCCAACTTCCCTTCTAAAGGATCGGAAGAGAGAAATAGATGGGAATCCTGATTTTAGTAACAAAGATCTTGGAGTAGCACATATATCTCAGTCCCAGATGATCTCGGAGCCTAAAACAATTTCTCCTCTTAAGCAAATAGATCTACTTCTTGATGTTGCAAATTCATCTAATACAGACGCTCCCTCGCAGTTATTGTCACAGTATGTAGCCCCTCAACGTGCTTATACTAATACTTCGGTGGAAGACGAAAAAGTTGTAACTCTAGGCTTGTCTGATCAGCTCTCGTCCCCACAAGGACCGTTCCAGTCGACTCCTCCCTTTTCTGTTAGCCAGCTGTCAGCAGCACTTCCGAACATTGGAAATCTTGTTGTTATCAATCAGAAATTAAGCGGATTTAGTAAGCACTTTCCATTTCAGAGAGTGGTACCACTTGCCATGGACAGAGCCATCAAGGAGATTGTGTCTGGTGTTGTTCAGCGAAGTGTTTGTATTGCTTGCCAGACAACAAAAGAGCTTGTGCTCAAGGATTATGCCTCGGAACCAGATGAGACACGTATATATAATGCAGCTCACTTGATGGTTGCTAGTTTAGCTGGGAGTTTGGCTCATGTGACGTGCAAGGAACCCCTGCGCACTTCAATTTCGGGTCATCTACGTAATTCGCTACAGGGTCCGAATATTAATAATGAAGCTCTTGAACAAATTGTTCAACTTGTCACCAATGACAACCTTGATTTGGGTTGTGCTGCCATTGAGCAGGCGGCTACAGAGAAGGCAATACAAAATATTGATGCGGACATTGCCCAGCAATTATCGTTGCGGAGAAAGCATAGAGATGGTGTTGGGTCCTCCTTTTTTGATCCAAACATGCGAACGCAAAATTCTGGCAGTTTTATACCTGAGTCCCTCAGCCCAAAACCGGGACAATTGTCCCTTTCTCAACAGCGCGTTTATGAGGACTTTGTTCAACTTTCTTGGCAAAAGCAGTCAGCCCAAACTTCACACGGTTTATCCGTTGCTTCAAGCTCATCCGGCGATGTTGGGCTTGGTAATGGTTATGGTCCAGTATCAGGAAAAAATGCTTCGGACTTCGAGTCTAGTGCTGGAAATGATCGGACGGATATGGCCTACCGGGCATCAGATACTTCTATGGAGGGTTTTCAATCCTCTCCAATTTCACTTTTAAGCTCACAAGTTGATCCAGCAGCCGGTCTTCAATTCTCTAAATCCCTTTCGACCTCTGAATTGAGCCTGGTTGAGTCCTCCGAGGCCGCTATGAAAGAAACTGGATCATCATTGCAAACGTTGACTTCATCTGCTACCATGGAGCGTCTTATTGGAAATAATACTCCACAGCCTTCTCTGTCCACGAGAGATGCATTGGACAAGTATCATATTGTTACTCAGGAGATGGAGAACTTAGTGGCTAATAATGCAGGAGATGATGAAATTCAGGCTGTAGTTTCTGAGGTTCCTGAAATCATCCTCAGATGTATAAGCAGAGATGAAGCAGCGTTAGCTGTTGCTCAAAAAGCTTTCAAGGCTCTTTATGAGAATGCATCAAGTAACCTTCACATCAGTGCTAACCTAGCAATTCTTGTGGCTATTCGTGATGTTTGCAAGCGTGTTGTTAAAGAGCTCACTAGTTGGGTGATTTATTCAGACGAGGAACGGAAGCTCAACAAAGATATTACTATTGGTCTTATCCAACGCGAGTTGCTTAACCTAGCGGAGTACAATGTCCACATGGCGAAGCATCTTGATGGAGGGAGAAACAAGAGCGCCACTGACTTTTCTATTTCTCTACTCCAATGCCTGGTCACTGAGAAGTCGAGTGTCATTTCAGAGCTACATAGCCTTGTTGATGCACTGGCCAAGCTTGCGGCAAAATCTGGATCTCCTGTCTCGTTGCAACAACTCATTGACATCATACGAAATCCGGTTACTAACACAAGTGGTCTCAGTGATAGTGCAACTGAAAACGAGATCAATGATATGCAATCAAAGGATGAAAAGGTTGTATGCAATACCATCGCTAACACAGAAGATAATACCAGCTTTGAATATGTGGAATCAGGTTCTACGGATTTCCGGAAACGGGTGTCCACGCTTTTTAAAAACTGGTATCAAGTCTGCGAAGTTTCGGGTGCAAATGAAACCGCTTGTTCAGAATATGTCTTGCATTTGTATCAGACTGGACTACTTAAGGGAGACGATACAACAGAGAGTTTTTTCCGAATTCTTCTGGAACTTTCTGTTGCTCATTGTATATCTTCTGAAGAAATTAGCTCTGGTGCTGTGCAATCTCCTCAGCAAGCTCAGAGTCCATCATTCCTTATCATCGATATTTTTGCAAAGCTTGTTTTTTCGATCTTGAAGTATTTCCCTGAACAAGAGTCTAGCAGCAAGTTTTTTCTTCTTTCGGAGATCATGGCTGTCACTGTGAGATCTATTCAAAAGGACGCAGAAGATAAAAAGGCATCACTCAGTCCAAGACCATATTTTAGATTGTTCATCAACTGGCTGCTGGACTTATGTTCCCTGGATCCTGTGACTGATGGTGCAAACTTTCAGGTTCTAACAGCTTTTGCTAATGCATTCCACGCATTGCAGCCTCTGAAGATTCCCGCTTTCAGCTTTGCATGGTTAGAGCTGGTCAGCCACAGAAGTTTCTTGCCCAAGCTACTTACAGTAAATGGACAGAAAGGTTGGCCATATGTTCAACGCCTGCTGGTAGACTTACTCCAGTTTCTTGAGCCATTTTTGAGAAATGCGGAACTCGGAGGACCGGTTCATATCCTATATAAAGGGACGCTGAGAGTGTTGCTGGTGCTGCTTCATGACTTCCCAGAGTTCCTCTGCGATTATCATTTTACTTTCTGTGATGTGATTCCTTCAAGTTGCGTACAAATGCGAAATATTATACTAAGTTCTTTTCCACGGAACATGAGGCTTCCAGACCCATCTACCCCAAATTTAAAGATTGATTTGCTGCCTGAGATAGTAGAAGCTCCGTGTATTCTATCTGAGGTTGATGCTGCGCTAAAAGCAAATCAAATGAAGAATGACGTGGAAGAGTATCTCACTTCGAGGCAACATGATACAACTTTCCTAAGTGAGTTGAAGCTGAAGCTACTTGTCTCGTCCAGCGAGGCTAGTTCAGCTGGAACTCGTTACAATGTACCATTGATCAACTCGCTGGTGTTATATACTGGAATGCAGGCTATTCAGCAGCTACAACAGGCGGGTGAGACAGGGGCTCAAAATGTGGTGGCCTTGCATATGTTCAAGTATTTAAGTGTGGAGCTTGACACAGAAGGGCGGTATCTGTTCCTAAATGCAATCGCCAATCAGCTTCGATATCCAAACAACCACACTCATTACTTCTCCTTCATCATGCTCTATCTCTTCTTGGAGTCTGACCAGGTGGTCATACAGGAGCAGATAACAAGAGTGTTGCTGGAAAGGCTAATTGTGAACAGGCCGCATCCATGGGGACTCCTGATAACGTTCATAGAGCTCATAAAGAATCCAAGGTATGGCTTCTGGAAACATGGCTTCATCAGGTGTGCTCCTGAGATTGAGAAACTCTTTGAATCGGTGGCCAGATCATGTGGTTGTCTCAAGCCCCTTGACGAGGGAATTGTCTCCGCCGGGTGGGTCTCGGAAAACTCTCATTAG |
| Protein: MSMTPSKVAGHTRFLLEHFNDSDVDSIAQEICQLVDYGVEASIPVLKTCVDCFTVRRSHPNTLQLEKLLALVFKRVLKLSNLGTLLSHALQDADVTPEFVHDLATALGFSVSDKITFALALVDFETSHAKTSGRNLLLAEIEQLCANNGQIESTEQIQNVVLFLQTSEDLSGHLESFLQLLSSSQPRDDLSFALTPLLSQHRSIDSAENDYDAILTEIDKEIAVGDLIGELGCGFTADAQQCKQLLSSFAPLREATISRILGHVARTSADLEDNHTTFSTFSLAVGCCIPTDLPTPTSWNVDILIETIKQLQAPGTSWRKVIENLDHSGFDIANMESFSFFMRLYKTACKDPFPLDAVCASVWNNMEGQLSFLKHAIAAPPEVFTFTHSPRKLAYIDNIMHSHDQQLGVSNQAWLSLDLLDVLCQLAERGHTVLVSSMLQYPLTHCPKTLLLGMTHVKTAYNLIQREVVSAILPVLITNSQDSGFILKLWHQNAELVLWGILNAQNLKSDGILRIIEIFHELKIFSVVLESVPVSFSIRLAVLASLRGFLDIENWLPNCLYVYKDLFAEECLKFVKYVHFSESEDFTSKHFHPSDPLSDLHLDATTLLLKVLKAHDNVITSSQLVEEMEKVNSAILDCNSKLQNGEAKDSSVPSPYGEDVEEEANAYFHQMFSGQLSVDAMVQMLSRYKESLVQREKSIFECMIANLFEEYRFFPKYPERQLKIASVLFGSVIKHQLVSSITLGMALRLVLDSLRKPADSKMFLFGSKALEQFVNRLVELPQYCNHILQISHLRSTHPELVAVIEQALSRISSGNLESDASFSHPGPSQSLPGNGEFSVSGIGQSPLQLPSPVQPQQKNEVHIDDRSKVPSVPSIETKPLLPSSSSSSADVSVIPKNPGISTSSLTSAGFVRPARGATSTRFGSALNIETLVAAAERRENAIEAPPSDVQDKISFIINNISIANIESKGKEFAEILSQQYYPWFAQYMVMKRASIEPNFHDLYLKFLDKVDSKLLFKEILQNTYENCKVLLGSELIKSSSEERSLLKNLGSWLGKLTIGRNYVLRAREIDPKSLIVEAYEKGLMIAVIPFTSKVLEPCQNSIAYQPPNPWTMAILGLLAEIYSMPNLKMNLKFDIEVLFKNLGVDLKEVAPTSLLKDRKREIDGNPDFSNKDLGVAHISQSQMISEPKTISPLKQIDLLLDVANSSNTDAPSQLLSQYVAPQRAYTNTSVEDEKVVTLGLSDQLSSPQGPFQSTPPFSVSQLSAALPNIGNLVVINQKLSGFSKHFPFQRVVPLAMDRAIKEIVSGVVQRSVCIACQTTKELVLKDYASEPDETRIYNAAHLMVASLAGSLAHVTCKEPLRTSISGHLRNSLQGPNINNEALEQIVQLVTNDNLDLGCAAIEQAATEKAIQNIDADIAQQLSLRRKHRDGVGSSFFDPNMRTQNSGSFIPESLSPKPGQLSLSQQRVYEDFVQLSWQKQSAQTSHGLSVASSSSGDVGLGNGYGPVSGKNASDFESSAGNDRTDMAYRASDTSMEGFQSSPISLLSSQVDPAAGLQFSKSLSTSELSLVESSEAAMKETGSSLQTLTSSATMERLIGNNTPQPSLSTRDALDKYHIVTQEMENLVANNAGDDEIQAVVSEVPEIILRCISRDEAALAVAQKAFKALYENASSNLHISANLAILVAIRDVCKRVVKELTSWVIYSDEERKLNKDITIGLIQRELLNLAEYNVHMAKHLDGGRNKSATDFSISLLQCLVTEKSSVISELHSLVDALAKLAAKSGSPVSLQQLIDIIRNPVTNTSGLSDSATENEINDMQSKDEKVVCNTIANTEDNTSFEYVESGSTDFRKRVSTLFKNWYQVCEVSGANETACSEYVLHLYQTGLLKGDDTTESFFRILLELSVAHCISSEEISSGAVQSPQQAQSPSFLIIDIFAKLVFSILKYFPEQESSSKFFLLSEIMAVTVRSIQKDAEDKKASLSPRPYFRLFINWLLDLCSLDPVTDGANFQVLTAFANAFHALQPLKIPAFSFAWLELVSHRSFLPKLLTVNGQKGWPYVQRLLVDLLQFLEPFLRNAELGGPVHILYKGTLRVLLVLLHDFPEFLCDYHFTFCDVIPSSCVQMRNIILSSFPRNMRLPDPSTPNLKIDLLPEIVEAPCILSEVDAALKANQMKNDVEEYLTSRQHDTTFLSELKLKLLVSSSEASSAGTRYNVPLINSLVLYTGMQAIQQLQQAGETGAQNVVALHMFKYLSVELDTEGRYLFLNAIANQLRYPNNHTHYFSFIMLYLFLESDQVVIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPRYGFWKHGFIRCAPEIEKLFESVARSCGCLKPLDEGIVSAGWVSENSH |